Insertion junction: CLIP2.031517_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031517
Chromosome:chromosome 16
Location:1203178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650650 AGT3 Alanine-glyoxylate aminotransferase; (1 of 1) 4.2.3.2 - Ethanolamine-phosphate phospho-lyase / O-phosphorylethanol-amine phospho-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTGTCCCAAAGTGTACCTGCGCACGTGTGACTGTTAGCCCCCCGCCT
Internal bar code:GAGAAGATTTCTCCCGTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTATGCACTGACACGCC
Suggested primer 2:AGGGCAGTGGGACTAGGTAG