Insertion junction: CLIP2.031521_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031521
Chromosome:chromosome 14
Location:3713910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631400 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATAGTTAGAGATTGCATCGGTGCCACGAGGGACCTGCTGACGCAGCT
Internal bar code:ATGTAAATTTCGTGTACCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCCGGAAGTCATGCTCG
Suggested primer 2:GGGCGCGAATAGTACGGTAA