Insertion junction: CLIP2.031524_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031524
Chromosome:chromosome 7
Location:3253289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAATACTTACGAAGCGGAACAGTAGGACCGCGGGCCCCATCATCACCG
Internal bar code:TGGTTATAGGACCCACCGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4074
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGATGTGCTGGGATCCTA
Suggested primer 2:CCATGTCAAGGCCAGTGCTA