Insertion junction: CLIP2.031530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031530
Chromosome:chromosome 6
Location:2681103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270600 CDS
lncRNA_TCONS_00027197 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCTGCAGCCACATTACCAATTCCCAAGTCCGCACCATGCAACATCT
Internal bar code:TTTGTCAAAGCTAAAGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTACAGGACCTGGGCT
Suggested primer 2:GTAACCCTCGCCGACATCAA