Insertion junction: CLIP2.031533_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031533
Chromosome:chromosome 3
Location:2769021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGAGTGCATGAGTCCTTCTCTCATGGCGCCCACAGGCCCTAGCCCGC
Internal bar code:ATTTTTTCCGAGGATATGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCTGTCTGTTGTTGCC
Suggested primer 2:GGCACTGTCATGCTTATGCG