Insertion junction: CLIP2.031535_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031535
Chromosome:chromosome 2
Location:3196794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTCCTAAGAGCGACACATACTGCAATACAACACGTGAACAGCTACTC
Internal bar code:ATCTGGCGAGAATTGAGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGATTGGTCGCTGTGTT
Suggested primer 2:CACACCCACACCCACTAGAC