Insertion junction: CLIP2.031538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031538
Chromosome:chromosome 1
Location:104849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000700 ZFR1 (1 of 2) PTHR14155//PTHR14155:SF170 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED; zinc finger protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTTCCCAGCAAAACATCCCGCAAACCGGTAGAAAGAAGGCGATGAGC
Internal bar code:AAGCGTTGTTGGAAGAAACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAGGCTCATGCACATA
Suggested primer 2:GCCACTGCAAAAGGTGTGAG