Insertion junction: CLIP2.031540_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031540
Chromosome:chromosome 13
Location:4796555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604650 (1 of 1) PTHR10804//PTHR10804:SF11 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // PROLIFERATION-ASSOCIATED PROTEIN 2G4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGAGTGGGCGTTAGAGCCAACTGCGACTCTCGGAGGGCTTCCGCTC
Internal bar code:ATTTTAGTCACAATATTGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1019
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACGACGGGTCTATTGAG
Suggested primer 2:GTTGCAGCCAAACGACTCAG