Insertion junction: CLIP2.031542_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031542
Chromosome:chromosome 15
Location:540868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636176 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGCTGGCGGTGGCGCGGACGGTAGCAGCGGCGGAGCAGTTGGTGGC
Internal bar code:TAGGGGATTACGAACAAATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:635
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCAGCAGCATCAGCAT
Suggested primer 2:TACAAACAGCAGGCGCAGTA