Insertion junction: CLIP2.031555_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031555
Chromosome:chromosome 8
Location:2846664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCCAGGTCCAGGCCCACGCACCCCTGCCACAGTCCCGCCACCATGC
Internal bar code:ATCTCAGGACTGCGTTTCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:74
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGTGGTGCTTGTGAGG
Suggested primer 2:ACACACACCTGGCCGTAAAT