Insertion junction: CLIP2.031557_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031557
Chromosome:chromosome 12
Location:1161364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490800 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCTGGCCGCAGTACAGGCCCTCCACCACGCGGCCTAGTGGACGTCG
Internal bar code:CGGGTCCGCAGACGTGGATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1522
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTGTAGTGTGGCGGAGG
Suggested primer 2:CGACACGTCCATATCGGTGT