Insertion junction: CLIP2.031557_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031557
Chromosome:chromosome 12
Location:1161366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490800 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCGTCAAGCTGCTCAACTACATGCCCAGCACCGCCGCCGCCGCCGC
Internal bar code:CGGGTCCGCAGACGTGGATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3592
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGACACGTCCATATCGGTGT
Suggested primer 2:ATTGTGTAGTGTGGCGGAGG