Insertion junction: CLIP2.031561_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031561
Chromosome:chromosome 6
Location:3442697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278102 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGCCCCGTCAGCAGGCCCGCCAGGTCCCAGCCCACGCTGAACAGGC
Internal bar code:TAACACTCCAGGATTTTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGCTGTTGCCTCTCTG
Suggested primer 2:CCGGCCTTCCTCCACAAATA