Insertion junction: CLIP2.031563_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031563
Chromosome:chromosome 5
Location:823392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGAGATGTCTTGTGACTAAGGCAGGCGGCGAGTAGGATGCGCACGGC
Internal bar code:CAGTCTTAAGAAGACGGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCATTGTCACCAAGAGA
Suggested primer 2:CACCTCATCCACACCGTTGA