Insertion junction: CLIP2.031567_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031567
Chromosome:chromosome 15
Location:1276332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCTATCGGGCGCTTCGTCAGGAGCAGCGGCAGGGGAAGGCATCGCT
Internal bar code:CGGACACTTTGTATAGCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCCATCACCCTAGCCT
Suggested primer 2:GCGAGGCAATGTACAGGAGT