Insertion junction: CLIP2.031567_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031567
Chromosome:chromosome 15
Location:1276332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCAGCCGCCGCAGCAGGTAGGCCTCCTGAGCGGAAGGCGTCCTCAGA
Internal bar code:CGGACACTTTGTATAGCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3677
LEAP-Seq percent confirming:92.5373
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGGCAATGTACAGGAGT
Suggested primer 2:ATCACCCATCACCCTAGCCT