Insertion junction: CLIP2.031574_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031574
Chromosome:chromosome 8
Location:1099456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362600 BLA1 (1 of 2) PF00144 - Beta-lactamase (Beta-lactamase); beta-lactamase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTGGCCAACAGCGACCCACGCGGTCAGCGGGCGCAGTATGCAAAGG
Internal bar code:AGAAACCTGATGGAACACTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1322
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCAAACGGCTCTAAGCG
Suggested primer 2:CACTTGCTGTCCTGTGTTGC