Insertion junction: CLIP2.031577_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031577
Chromosome:chromosome 4
Location:2246888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACGAAGTCGTTACCACATGAGCGGCCGTCCGGGCGGCCGCGCTCC
Internal bar code:GTAAGATCCACGGACTGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACCCTTTTGCCCCCTTT
Suggested primer 2:ACCCTCCCACAGATGATCCA