Insertion junction: CLIP2.031579_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031579
Chromosome:chromosome 1
Location:6790220
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048600 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAACCCAATAAGGGGACAGCCGTGCATGGAAGTTGAGTGAGGGGCA
Internal bar code:ATATCGACTCAGAAACTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5946
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGTTGAAGGGCTCAC
Suggested primer 2:GGTACTTCATCCGCCGGTAG