Insertion junction: CLIP2.031589_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031589
Chromosome:chromosome 2
Location:7465860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800264 CDS
Cre02.g800265 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCGGGCCTGCAGTCCAGGCGGTGTAGTCGGTTGGGTTGCAGATGAA
Internal bar code:ACTGAGCCTACCATCTGATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3151
LEAP-Seq percent confirming:79.661
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTCAGGCCTGTTACCGT
Suggested primer 2:ACAAACTCCGCCTTCGTGAT