Insertion junction: CLIP2.031610_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031610
Chromosome:chromosome 11
Location:609533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGTTCACTTGAGATTGGCATAAACTACCGGTACCCCGGACGTCGACA
Internal bar code:TTCTTTCGTATTCCTGAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1122
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGCTGATGTTGAAGG
Suggested primer 2:GTCCTTTGAACACGTGTGCC