Insertion junction: CLIP2.031616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031616
Chromosome:chromosome 6
Location:4043779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278219 SSA6 cilia-sensing, structure and/or assembly; (1 of 239) IPR016024 - Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGCTCCCAGCCCGCTGGGCGCGGCCGCGGGTGGCGCCACGCCGGAGC
Internal bar code:AGTTCTTCTATGAGTGGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCGTTGTCGTTGTTGG
Suggested primer 2:GGGTGGGTGCAAAGATGGTA