Insertion junction: CLIP2.031623_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031623
Chromosome:chromosome 15
Location:582518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTGTACACAGAATGTGCCATGCGGTCAAGTGCCCTGTGCCGTACCGG
Internal bar code:TCGGTCAGCGTATTGGATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTGACACCATTTCGCT
Suggested primer 2:TTCACCTCAGTTCACGCCTC