Insertion junction: CLIP2.031632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031632
Chromosome:chromosome 10
Location:482450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421000 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAACACATCTCCCTCACCTGCTGACCATCACAGCTGACACGCCCTCA
Internal bar code:TGTGGCTCACGATTTGGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCAGACAATCAGCAGC
Suggested primer 2:TGTCTTGGTACGGCACTCAC