Insertion junction: CLIP2.031633_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031633
Chromosome:chromosome 16
Location:1758874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654950 SRR3 Scavenger receptor cysteine rich (SRCR) protein; (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACATACACACACGCCAGCAGCTGCTCGCTCGCACCTGTTCCTAAGC
Internal bar code:AATTTGGGCTTGACATGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGTAGCGGCAGTAGTAG
Suggested primer 2:AGCGAGTGAGTGGACAAGTG