Insertion junction: CLIP2.031641_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031641
Chromosome:chromosome 9
Location:2414492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAATTAATATGATTTAGGGGTACATTAGCTAAACTAAATATGGATAAT
Internal bar code:TAACAAGAAGGTGAATGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCAACCCTCTCACCTC
Suggested primer 2:CAGTCGGTGGAGAGGTTGAC