Insertion junction: CLIP2.031641_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031641
Chromosome:chromosome 9
Location:2414495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCGTCATGGCGATGCCGCAGAGCCCCTGGCCTGTGATCAACTTTGC
Internal bar code:ATAGATACTACTTCCACTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCGGTGGAGAGGTTGAC
Suggested primer 2:CCAACCAACCCTCTCACCTC