Insertion junction: CLIP2.031643_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031643
Chromosome:chromosome 7
Location:6121218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355650 AMT1F,AMT6 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGCTGCGGATTGCCCCCGCCTCCAGCATCGCGAACCCTCCGTGCCT
Internal bar code:TCTTAGAGCTTCCGTTTATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2584
LEAP-Seq percent confirming:94.9495
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACTGTTTGCAGCGTCG
Suggested primer 2:GTAGAACTAGGGTGCCGAGC