Insertion junction: CLIP2.031650_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031650
Chromosome:chromosome 2
Location:2821781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094551 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGAGGCTGGAGCAGGAGGGGCCGCAGCTTTCGGCGAGCCAGGCGTCG
Internal bar code:TAGTTTATGTGTAAGTTTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTACGGTATCGCTGTGCC
Suggested primer 2:TGTACACGTGTCTTTGCCGA