Insertion junction: CLIP2.031652_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031652
Chromosome:chromosome 5
Location:2033969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236500 (1 of 1) 3.5.1.23 - Ceramidase / Acylsphingosine deacylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCTAGGGCATGTGTGGACACGCGACACGCCAACCCGACCAGCGAAC
Internal bar code:AAGCTACGGGGGCTCCCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGACTGTCTACGCACAAC
Suggested primer 2:GCTCATACCCACGCTCTCTC