Insertion junction: CLIP2.031659_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031659
Chromosome:chromosome 17
Location:2561987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716050 (1 of 1) PTHR20953:SF2 - PROTEIN SEEDLING PLASTID DEVELOPMENT 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCACACCTCCCGCAGCGCCGTGGTCTTGCCCACACCTGCGCCAGCAC
Internal bar code:GCTAATGTATCACTAGCCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGGCACATGGTAATGG
Suggested primer 2:CGCGCTAACATGTTCCTTCG