Insertion junction: CLIP2.031662_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031662
Chromosome:chromosome 5
Location:1824342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235450 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCGGTTTCGGCCGTGCTGGGCAGCGCGCCGCTGCAGCATGGCCAGC
Internal bar code:CGGAACAGTCCTTCGAGCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCCGGATGAAGGAGTA
Suggested primer 2:TCCATCACGAGTGCTGTAGC