Insertion junction: CLIP2.031666_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031666
Chromosome:chromosome 9
Location:4534749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGATAGATCGACAGCCAAGCCGTTGATTGCATATTACGGTACCATC
Internal bar code:CCTGACTCAACTGCCTCGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3024
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTGCATGCTGGAGAAG
Suggested primer 2:GTACGCTATGTCGTGTCCGT