Insertion junction: CLIP2.031674_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031674
Chromosome:chromosome 2
Location:3248020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097213 (1 of 1) PTHR19331//PTHR19331:SF322 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCGTTGACTCCCTGCATGCCCAGGTAGGTCAGCGGCGGCAGGCCGCT
Internal bar code:TGTCGGAGGGTATATACGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGAGAACCAACACCGGG
Suggested primer 2:CCTGTCTTGTGCTGTTGTGC