Insertion junction: CLIP2.031678_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031678
Chromosome:chromosome 16
Location:1691525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654700 PHC61 Pherophorin-chlamydomonas homolog 61; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGGTGGGCGCAGCGGACGAGCTCGGCGTGGATTCCACCGCGCTCT
Internal bar code:TACCAGGTAGTATCACTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:7.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGAAGTTGACGGGGAG
Suggested primer 2:CGAGCTTGACTCTCAGTGCA