Insertion junction: CLIP2.031699_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031699
Chromosome:chromosome 2
Location:7679891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00136852

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGGGATTTGTGGGATGGCAAAGCAGTATGAAAGTTTGCGATGGGAGT
Internal bar code:TGAAAGCTTGGTATAACGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3001
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAGGGGAGGCACTACTA
Suggested primer 2:GCGGGGCTGAAACAACATTT