Insertion junction: CLIP2.031712_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031712
Chromosome:chromosome 3
Location:5743940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187300 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAGTAAGTTTGTCGGCCAGGCCGTCAACTCCCAAACGCCGTCCCCT
Internal bar code:TGTCCTAACGGTTAGAAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4135
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTGGACATGGTGGCAG
Suggested primer 2:CAGGATAGTGAGAGGCAGCG