Insertion junction: CLIP2.031717_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031717
Chromosome:chromosome 16
Location:336926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694208 (1 of 1) IPR001965//IPR011011//IPR019787//IPR028941 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger // WHIM2 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACATCCCAACACGTCACGCGTGTCGCCCTGCTGCTCACGCAGGCCGC
Internal bar code:CGGGAGCTGACTTGAGGGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCCTCCGGTATGTCGAG
Suggested primer 2:GCGAAACGTTGTGATTGCCT