Insertion junction: CLIP2.031722_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031722
Chromosome:chromosome 15
Location:901852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACCTGCACACTCAGCCCGCACTCGTCCAAAAGGTACGCCAGCGCGT
Internal bar code:ACAGTGCAGCTGTTTCCAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2345
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GATTAAAGTCGAACGGCCGC
Suggested primer 2:CTGCCCATCCTGCTTCTTCA