Insertion junction: CLIP2.031730_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031730
Chromosome:chromosome 1
Location:7883871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055440 CSR8 Carbohydrate sulfotransferase-related 8; (1 of 1) 2.8.2.30 - [Heparan sulfate]-glucosamine 3-sulfotransferase 3 / Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCACGTACGCAGACCGGCACCACGTCCCTGTACCAACACCTCATGA
Internal bar code:GATGCGAATTGTTGCACTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTGTGTGTCCTGTGGGG
Suggested primer 2:AGTTCAACCCACCACAGCAA