Insertion junction: CLIP2.031731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031731
Chromosome:chromosome 10
Location:4451952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450700 CSB329,TNP26 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCAGCCGACGGCGTTCAGCGTGGCAGACGACTGCATGCCCCCGCCG
Internal bar code:TGGGTGAACACAGAGTCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACTTGTCAGGAGCCGA
Suggested primer 2:ACAACTCCTCATCCAGCTGC