Insertion junction: CLIP2.031762_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031762
Chromosome:chromosome 12
Location:3851608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515050 HLM18,SET4 putative N-methyltransferase; (1 of 1) PTHR13793:SF5 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCACAAAGCTGCAAGCACACTTAACCGGCGACGCAGTCAGGGAGGGA
Internal bar code:ACGTTGTGGTGCAAATTAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGCATGCATGTGAA
Suggested primer 2:CAGAGGAGTACCGGCATGTC