Insertion junction: CLIP2.031776_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031776
Chromosome:chromosome 8
Location:3040367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375200 (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCGCACCTTGCCTGTCTTGCGTATACTTCTCTGCTCTGTCATGCCT
Internal bar code:TGTATTGACGATTAGGTAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTATGTCCTGAGGTGCG
Suggested primer 2:GTCGGCACTCCCAACTTGTA