Insertion junction: CLIP2.031784_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031784
Chromosome:chromosome 14
Location:1576317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTGGTACCTCCATGCCAACTCCTCCTGAGTCCCGCACATCGCTGCA
Internal bar code:AAGGATCTAATTATGCTTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACACACTGGATGACCA
Suggested primer 2:CCGATCGCTTCTGCAATTCC