Insertion junction: CLIP2.031786_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031786
Chromosome:chromosome 9
Location:2994919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393432 (1 of 1) IPR002421//IPR029060 - 5'-3' exonuclease, N-terminal // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACGCGCGCAGGCCCGACGTACGTGGTCTTTGACAACAAGCGGGGCA
Internal bar code:TGGTTTGTTAATATCGCTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCCTCTGTCAACTGG
Suggested primer 2:ACCGACTCGACCACCTCATA