Insertion junction: CLIP2.031788_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031788
Chromosome:chromosome 14
Location:816460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612850 (1 of 93) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAATAATCATGAATGTAAGCCCTCCCCCCGCCGGCCCCACCTGCAGT
Internal bar code:CATGTGGAGTGTTTCAAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACGTATCATGCTGGGC
Suggested primer 2:AACAGGCCAGAGAACCGATG