Insertion junction: CLIP2.031789_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031789
Chromosome:chromosome 2
Location:1289270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082350 CUTA1,CUT1 (1 of 1) K03926 - periplasmic divalent cation tolerance protein (cutA); Copper-binding protein CutA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATCCCTTGAGCCAACGTGCATCCCAACGCCGCCCGCGCCGACCCCAC
Internal bar code:AGTGCTGAAGCCCTGAACATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATAGACGCACCGAAGC
Suggested primer 2:CCCTGTTGGCGTTGTTTAGC