Insertion junction: CLIP2.031794_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031794
Chromosome:chromosome 3
Location:3479707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167200 (1 of 1) PTHR23097//PTHR23097:SF107 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGGCAGTGCGGCGCGGGGAAGCATCGAGGCGCACCCTGTGATGTTTG
Internal bar code:GTCTGACGTAATGTAGTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACGACTTCTCCAACGAA
Suggested primer 2:TCGGATCAGTAATGCCGACG