Insertion junction: CLIP2.031796_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031796
Chromosome:chromosome 12
Location:5028011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525350 PTK15 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGCAGCGTGTCACTGGCGCCGCCACCTGCCTCGCCACGCGGGTTC
Internal bar code:AATTATTTCATGGATGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TAATGGCGATCACGAGCTCC
Suggested primer 2:ATCACATGCAGGACTCGTGG