Insertion junction: CLIP2.031801_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031801
Chromosome:chromosome 2
Location:6932774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389023 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGTCACAATGCTATGTTCACGCTCAACCTAGTGCGCTGGCCCCGTC
Internal bar code:CACACTTTGGTGCAGGATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:36.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTAGTACCTCTCAGCCA
Suggested primer 2:GATGAAAGGCCGGCGATAGA